Trans-meQTLs across different cancer types

In trans-meQTL analyses, we identified 965,050 trans-meQTLs at FDR < 0.05 and |r|>=0.3 in 23 cancer types for users to search or browse.

     

e.g., "BLCA"
e.g., "rs4975682"
e.g., "cg25599786"
e.g., "PDCD6"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Methylation probe
Methylation position (hg19)
Gene symbol
Beta
t-stat
r
p-valule
Display
BLCA rs2890925 chr11:50272662 T/G cg15704280 chr7:45808275 SEPT13 -1.02 -24.42 -0.78 6.89E-80 Box Plot
BLCA rs34268597 chr3:125764655 G/GA cg26321609 chr3:123680480 CCDC14 1.15 25.96 0.8 3.47E-86 Box Plot
BLCA rs34326152 chr3:125748858 T/C cg26321609 chr3:123680480 CCDC14 -1.17 -24.75 -0.79 3.16E-81 Box Plot
BLCA rs34767930 chr11:50351031 G/GC cg15704280 chr7:45808275 SEPT13 -1.03 -24.23 -0.78 4.28E-79 Box Plot
BLCA rs34825294 chr11:50395501 TA/T cg15704280 chr7:45808275 SEPT13 -1.03 -24.39 -0.78 9.95E-80 Box Plot
BLCA rs34828359 chr3:125767409 C/A cg26321609 chr3:123680480 CCDC14 -1.15 -25.81 -0.8 1.46E-85 Box Plot
BLCA rs34923610 chr3:125747170 TC/T cg26321609 chr3:123680480 CCDC14 -1.16 -26.26 -0.8 2.03E-87 Box Plot
BLCA rs35120077 chr3:125709366 G/A cg26321609 chr3:123680480 CCDC14 -1.18 -26.57 -0.81 1.19E-88 Box Plot
BLCA rs35332488 chr3:125761747 T/C cg26321609 chr3:123680480 CCDC14 -1.16 -26.17 -0.8 4.74E-87 Box Plot
BLCA rs35441571 chr11:50412238 CT/C cg15704280 chr7:45808275 SEPT13 -1.03 -24.46 -0.78 4.89E-80 Box Plot
BLCA rs35545111 chr3:125730746 G/GT cg26321609 chr3:123680480 CCDC14 -1.18 -24.93 -0.79 5.7E-82 Box Plot
BLCA rs35663418 chr11:50371297 G/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.97 -0.79 3.94E-82 Box Plot
BLCA rs36024720 chr11:50239547 AC/A cg15704280 chr7:45808275 SEPT13 -1.03 -24.52 -0.78 2.64E-80 Box Plot
BLCA rs36103924 chr11:50325227 GA/G cg15704280 chr7:45808275 SEPT13 -1.03 -24.59 -0.78 1.36E-80 Box Plot
BLCA rs3750371 chr11:50257362 T/G cg15704280 chr7:45808275 SEPT13 -1.02 -24.49 -0.78 3.7E-80 Box Plot